PathEdEx – Uncovering High-explanatory Visual Diagnostics Heuristics Using Digital Pathology and Multiscale Gaze Data
نویسندگان
چکیده
BACKGROUND Visual heuristics of pathology diagnosis is a largely unexplored area where reported studies only provided a qualitative insight into the subject. Uncovering and quantifying pathology visual and nonvisual diagnostic patterns have great potential to improve clinical outcomes and avoid diagnostic pitfalls. METHODS Here, we present PathEdEx, an informatics computational framework that incorporates whole-slide digital pathology imaging with multiscale gaze-tracking technology to create web-based interactive pathology educational atlases and to datamine visual and nonvisual diagnostic heuristics. RESULTS We demonstrate the capabilities of PathEdEx for mining visual and nonvisual diagnostic heuristics using the first PathEdEx volume of a hematopathology atlas. We conducted a quantitative study on the time dynamics of zooming and panning operations utilized by experts and novices to come to the correct diagnosis. We then performed association rule mining to determine sets of diagnostic factors that consistently result in a correct diagnosis, and studied differences in diagnostic strategies across different levels of pathology expertise using Markov chain (MC) modeling and MC Monte Carlo simulations. To perform these studies, we translated raw gaze points to high-explanatory semantic labels that represent pathology diagnostic clues. Therefore, the outcome of these studies is readily transformed into narrative descriptors for direct use in pathology education and practice. CONCLUSION PathEdEx framework can be used to capture best practices of pathology visual and nonvisual diagnostic heuristics that can be passed over to the next generation of pathologists and have potential to streamline implementation of precision diagnostics in precision medicine settings.
منابع مشابه
Florid Adnexal Polypoid Endometriosis Associated with Very High Serum Ca - 125 Levels Mimicking Ovarian Malignancy
We report a case of florid polypoid endometriosis presenting with advanced bulky disease in pelvis with serum CA – 125 levels of 7844U/ml. The extent of tumor, CT scan findings, elevated serum CA – 125 levels were suggestive of ovarian malignancy. Histopathology demonstrated endometrial glands and stroma. Glands were neither crowded nor complex and were separated by a fibromatous stroma that co...
متن کاملA FEM Multiscale Homogenization Procedure using Nanoindentation for High Performance Concrete
This paper aims to develop a numerical multiscale homogenization method for prediction of elasto-viscoplastic properties of a high performance concrete (HPC). The homogenization procedure is separated into two-levels according to the microstructure of the HPC: the mortar or matrix level and the concrete level. The elasto-viscoplastic behavior of individual microstructural phases of the matrix a...
متن کاملAn Efficient Multiscale Phase Spectrum based Salient Object Detection Technique
Automatic image segmentation is emerging field in image processing research domain. Many researchers have developed various techniques for segmenting the interested region in an image. Saliency based image segmentation is one of the keen area of research. In a visual scene, the objects which are different from their surroundings get more visual importance and get high gaze attention of the view...
متن کاملSteganography Scheme Based on Reed-Muller Code with Improving Payload and Ability to Retrieval of Destroyed Data for Digital Images
In this paper, a new steganography scheme with high embedding payload and good visual quality is presented. Before embedding process, secret information is encoded as block using Reed-Muller error correction code. After data encoding and embedding into the low-order bits of host image, modulus function is used to increase visual quality of stego image. Since the proposed method is able to embed...
متن کاملMouse cursor movement and eye tracking data as an indicator of pathologists’ attention when viewing digital whole slide images
CONTEXT Digital pathology has the potential to dramatically alter the way pathologists work, yet little is known about pathologists' viewing behavior while interpreting digital whole slide images. While tracking pathologist eye movements when viewing digital slides may be the most direct method of capturing pathologists' viewing strategies, this technique is cumbersome and technically challengi...
متن کامل